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Viruses for In Vitro Antiviral Testing

Below is a list of the viruses for which we have established in vitro assays for screening:
 
Family Genus Virus Strain
Adenoviridae Mastadenovirus Adenovirus 15 serotypes
Arenaviridae    Arenavirus    Junin Candid #1 and Romero
Arenavirus    Tacaribe TRVL 11573
Arenavirus     Pichinde An 4763
Arenavirus     Lymphocytic choriomeningitis Armstrong and Clone 13
Caliciviridae Norovirus Murine norovirus CW1
Coronaviridae Betacoronavirus Middle Eastern Respiratory Syndrome
Coronavirus (MERS-CoV)
EMC and Hul Jordan
Coronavirus Corona Human (alpha and beta), rat and mouse
Coronavirus  Severe Acute Respiratory Syndrome
Coronavirus (SARS-CoV)
Urbani, Toronto-2, Frankfurt-1, CuHK-1 
Betacoronavirus Severe Acute Respiratory Syndrome
Coronavirus 2 (SARS-CoV-2)
USA_WA1/2020
Flaviviridae        Flavivirus Banzi H336
Flavivirus Dengue Serotypes 2 and 3
Flavivirus  Japanese encephalitis  SA-14
Flavivirus  Powassan LB
Flavivirus  Usutu South Africa and Austria
Flavivirus  West Nile NY WNV and WN02
Flavivirus  Yellow Fever 17D
Flavivirus  Zika Malaysia, Uganda, Puerto Rico
Hantaviridae     Orthohantavirus Dobrava  Sotkamo 
Orthohantavirus Hantaan 76-118 
Orthohantavirus  Sin Nombre SN77734 
Orthohantavirus  Andes Chile-9717869 
Orthohantavirus  Maporal HV 97021050 
Herpesviridae Simplexvirus Herpes Types 1 and 2
Orthomyxoviridae Alphainfluenzavirus  Influenza A 30 serotypes of pandemic and seasonal H1N1,
seasonal H3N2, low-path avian H5N1, 
high-path avian H5N1, H7N9, many avian isolates,
some oseltamivir-resistant and  
amantadine-resistant strains 
Influenzavirus B  Influenza B  Isolates from Yamagata and Victoria lineages
Paramyxoviridae   Morbillivirus  Measles  CC, Edmonston, Schwarz 
Respirovirus Parainfluenza 14702
Pneumovirus Respiratory syncytial Human A and B strains, clinical isolates and bovine
Phenuiviridae Phlebovirus      Punta Toro  Adames
Phlebovirus   MP-12, ZH501  MP-12, ZH501 
Phlebovirus    Severe fever with thrombocytopenia syndrome  HB-29 
Phlebovirus    Heartland MO-4 
Phlebovirus    Sandfly fever Naples 
Picornaviridae Enterovirus Coxsackie B3 HA 201933
Enterovirus  Enterovirus D68 Fermon, US/KY/14-18953, US/MO/14-18947,
US/MO/14-18949, US/IL/14-18952
Enterovirus  Enterovirus-71 Tainan/4643/98, MP4
Enterovirus  Poliovirus Type 1 Mahoney
Enterovirus  Poliovirus Type 3 WM-3, Leon
Cardiovirus Encephalomyocarditis  
Cardiovirus ECHO 12  
Rhinovirus Rhino 100 strains and clinical isolates 
Poxviridae  Orthopoxvirus  Cowpox  Brighton 
Orthopoxvirus Vaccinia WR and IHD
Reoviridae Reovirus Reo  
Cardiovirus Rota Human, simian, and bovine
Rhabdoviridae Vesiculovirus Vesicular stomatitis  
Togaviridae      Alphavirus Chikungunya  LR06 and S27
Alphavirus Semliki Forest  Original 
Alphavirus  Eastern equine encephalitis  FL93-939 
Alphavirus  Venezuelan equine encephalitis  TC-83 and TrD 
Alphavirus  Western equine encephalitis  California (VR-70)